3D structure

PDB id
5WE6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
5WE6|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5WE6|1|A|C|817
5WE6|1|A|G|818
5WE6|1|A|A|819
5WE6|1|A|A|820
5WE6|1|A|A|821
5WE6|1|A|G|822
*
5WE6|1|A|C|835
5WE6|1|A|G|836
5WE6|1|A|C|837
5WE6|1|A|C|838
*
5WE6|1|A|G|940
5WE6|1|A|A|941
5WE6|1|A|G|942
5WE6|1|A|A|943
5WE6|1|A|C|944
5WE6|1|A|A|945
5WE6|1|A|C|946
*
5WE6|1|A|G|971
5WE6|1|A|A|972
5WE6|1|A|A|973
5WE6|1|A|G|974
5WE6|1|A|A|975
5WE6|1|A|G|976
*
5WE6|1|A|C|987
5WE6|1|A|A|988
5WE6|1|A|G|989
5WE6|1|A|A|990
5WE6|1|A|C|991
*
5WE6|1|A|G|1163
5WE6|1|A|C|1164
*
5WE6|1|A|G|1185
5WE6|1|A|G|1186
5WE6|1|A|G|1187
5WE6|1|A|U|1188
5WE6|1|A|A|1189
5WE6|1|A|G|1190

Current chains

Chain A
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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