J7_5WF0_001

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

5WF0|1|A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WF0|1|A|C|8
5WF0|1|A|G|9
5WF0|1|A|A|10
5WF0|1|A|C|11
5WF0|1|A|U|12
5WF0|1|A|A|13
5WF0|1|A|A|14
5WF0|1|A|G|15
*
5WF0|1|A|U|525
5WF0|1|A|A|526
5WF0|1|A|C|527
5WF0|1|A|A|528
5WF0|1|A|A|529
5WF0|1|A|G|530
5WF0|1|A|C|531
*
5WF0|1|A|G|2018
5WF0|1|A|A|2019
5WF0|1|A|A|2020
5WF0|1|A|C|2021
5WF0|1|A|U|2022
5WF0|1|A|C|2023
*
5WF0|1|A|G|2040
5WF0|1|A|U|2041
5WF0|1|A|A|2042
5WF0|1|A|C|2043
*
5WF0|1|A|G|2625
5WF0|1|A|C|2626
5WF0|1|A|G|2627
5WF0|1|A|C|2628
5WF0|1|A|U|2629
5WF0|1|A|G|2630
*
5WF0|1|A|C|2788
5WF0|1|A|C|2789
*
5WF0|1|A|G|2894
5WF0|1|A|G|2895

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22