3D structure

PDB id
5WFK (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
5WFK|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5WFK|1|A|C|817
5WFK|1|A|G|818
5WFK|1|A|A|819
5WFK|1|A|A|820
5WFK|1|A|A|821
5WFK|1|A|G|822
*
5WFK|1|A|C|835
5WFK|1|A|G|836
5WFK|1|A|C|837
5WFK|1|A|C|838
*
5WFK|1|A|G|940
5WFK|1|A|A|941
5WFK|1|A|G|942
5WFK|1|A|A|943
5WFK|1|A|C|944
5WFK|1|A|A|945
5WFK|1|A|C|946
*
5WFK|1|A|G|971
5WFK|1|A|A|972
5WFK|1|A|A|973
5WFK|1|A|G|974
5WFK|1|A|A|975
5WFK|1|A|G|976
*
5WFK|1|A|C|987
5WFK|1|A|A|988
5WFK|1|A|G|989
5WFK|1|A|A|990
5WFK|1|A|C|991
*
5WFK|1|A|G|1163
5WFK|1|A|C|1164
*
5WFK|1|A|G|1185
5WFK|1|A|G|1186
5WFK|1|A|G|1187
5WFK|1|A|U|1188
5WFK|1|A|A|1189
5WFK|1|A|G|1190

Current chains

Chain A
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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