J7_5WFS_001

3D structure

PDB id

5WFS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

5WFS|1|A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WFS|1|A|C|8
5WFS|1|A|G|9
5WFS|1|A|A|10
5WFS|1|A|C|11
5WFS|1|A|U|12
5WFS|1|A|A|13
5WFS|1|A|A|14
5WFS|1|A|G|15
*
5WFS|1|A|U|525
5WFS|1|A|A|526
5WFS|1|A|C|527
5WFS|1|A|A|528
5WFS|1|A|A|529
5WFS|1|A|G|530
5WFS|1|A|C|531
*
5WFS|1|A|G|2018
5WFS|1|A|A|2019
5WFS|1|A|A|2020
5WFS|1|A|C|2021
5WFS|1|A|U|2022
5WFS|1|A|C|2023
*
5WFS|1|A|G|2040
5WFS|1|A|U|2041
5WFS|1|A|A|2042
5WFS|1|A|C|2043
*
5WFS|1|A|G|2625
5WFS|1|A|C|2626
5WFS|1|A|G|2627
5WFS|1|A|C|2628
5WFS|1|A|U|2629
5WFS|1|A|G|2630
*
5WFS|1|A|C|2788
5WFS|1|A|C|2789
*
5WFS|1|A|G|2894
5WFS|1|A|G|2895

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22