3D structure

PDB id
5WFS (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
5WFS|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5WFS|1|A|C|817
5WFS|1|A|G|818
5WFS|1|A|A|819
5WFS|1|A|A|820
5WFS|1|A|A|821
5WFS|1|A|G|822
*
5WFS|1|A|C|835
5WFS|1|A|G|836
5WFS|1|A|C|837
5WFS|1|A|C|838
*
5WFS|1|A|G|940
5WFS|1|A|A|941
5WFS|1|A|G|942
5WFS|1|A|A|943
5WFS|1|A|C|944
5WFS|1|A|A|945
5WFS|1|A|C|946
*
5WFS|1|A|G|971
5WFS|1|A|A|972
5WFS|1|A|A|973
5WFS|1|A|G|974
5WFS|1|A|A|975
5WFS|1|A|G|976
*
5WFS|1|A|C|987
5WFS|1|A|A|988
5WFS|1|A|G|989
5WFS|1|A|A|990
5WFS|1|A|C|991
*
5WFS|1|A|G|1163
5WFS|1|A|C|1164
*
5WFS|1|A|G|1185
5WFS|1|A|G|1186
5WFS|1|A|G|1187
5WFS|1|A|U|1188
5WFS|1|A|A|1189
5WFS|1|A|G|1190

Current chains

Chain A
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1317 s