3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG
Length
32 nucleotides
Bulged bases
6BZ6|1|RA|A|945, 6BZ6|1|RA|C|974|||A
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6BZ6|1|RA|C|817
6BZ6|1|RA|G|818
6BZ6|1|RA|A|819
6BZ6|1|RA|A|820
6BZ6|1|RA|A|821
6BZ6|1|RA|U|822
*
6BZ6|1|RA|A|835
6BZ6|1|RA|G|836
*
6BZ6|1|RA|U|943
6BZ6|1|RA|G|944
6BZ6|1|RA|A|945
6BZ6|1|RA|G|946
*
6BZ6|1|RA|C|971
6BZ6|1|RA|G|972
6BZ6|1|RA|A|973
6BZ6|1|RA|G|974
6BZ6|1|RA|C|974|||A
6BZ6|1|RA|G|975
6BZ6|1|RA|C|976
*
6BZ6|1|RA|G|987
6BZ6|1|RA|A|988
6BZ6|1|RA|G|989
6BZ6|1|RA|A|990
6BZ6|1|RA|C|991
*
6BZ6|1|RA|G|1163
6BZ6|1|RA|G|1164
*
6BZ6|1|RA|C|1185
6BZ6|1|RA|G|1186
6BZ6|1|RA|G|1187
6BZ6|1|RA|U|1188
6BZ6|1|RA|A|1189
6BZ6|1|RA|G|1190

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R3
50S ribosomal protein L30
Chain R8
50S ribosomal protein L35
Chain RB
5S ribosomal RNA; 5S rRNA
Chain RP
50S ribosomal protein L15
Chain RU
50S ribosomal protein L20
Chain RV
50S ribosomal protein L21

Coloring options:

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