3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
Length
35 nucleotides
Bulged bases
6BZ8|1|YA|G|530, 6BZ8|1|YA|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6BZ8|1|YA|A|8
6BZ8|1|YA|U|9
6BZ8|1|YA|G|10
6BZ8|1|YA|G|11
6BZ8|1|YA|U|12
6BZ8|1|YA|A|13
6BZ8|1|YA|A|14
6BZ8|1|YA|G|15
*
6BZ8|1|YA|U|525
6BZ8|1|YA|A|526
6BZ8|1|YA|C|527
6BZ8|1|YA|A|528
6BZ8|1|YA|A|529
6BZ8|1|YA|G|530
6BZ8|1|YA|C|531
*
6BZ8|1|YA|G|2018
6BZ8|1|YA|A|2019
6BZ8|1|YA|A|2020
6BZ8|1|YA|C|2021
6BZ8|1|YA|U|2022
6BZ8|1|YA|G|2023
*
6BZ8|1|YA|C|2040
6BZ8|1|YA|U|2041
6BZ8|1|YA|A|2042
6BZ8|1|YA|C|2043
*
6BZ8|1|YA|G|2625
6BZ8|1|YA|C|2626
6BZ8|1|YA|G|2627
6BZ8|1|YA|C|2628
6BZ8|1|YA|A|2629
6BZ8|1|YA|G|2630
*
6BZ8|1|YA|C|2788
6BZ8|1|YA|C|2789
*
6BZ8|1|YA|G|2894
6BZ8|1|YA|U|2895

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y5
50S ribosomal protein L32
Chain YE
50S ribosomal protein L3
Chain YN
50S ribosomal protein L13
Chain YU
50S ribosomal protein L20
Chain YW
50S ribosomal protein L22

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2178 s