J7_6CFJ_003
3D structure
- PDB id
- 6CFJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG
- Length
- 32 nucleotides
- Bulged bases
- 6CFJ|1|2A|A|945, 6CFJ|1|2A|C|975
- QA status
- Valid loop
Sequence variability
- 
                            If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
                            
- R3DSVS
Structural variability across Equivalence Class
- 
                            The link below will give the loop's structural variability across the equivalence class for this chain.
                            
- R3DMCS EC
Structural variability across Rfam
- 
                            If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
                            
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6CFJ|1|2A|C|817
  6CFJ|1|2A|G|818
  6CFJ|1|2A|A|819
  6CFJ|1|2A|A|820
  6CFJ|1|2A|A|821
  6CFJ|1|2A|U|822
  * 
6CFJ|1|2A|A|835
  6CFJ|1|2A|G|836
  * 
6CFJ|1|2A|U|943
  6CFJ|1|2A|G|944
  6CFJ|1|2A|A|945
  6CFJ|1|2A|G|946
  * 
6CFJ|1|2A|C|971
  6CFJ|1|2A|G|972
  6CFJ|1|2A|A|973
  6CFJ|1|2A|G|974
  6CFJ|1|2A|C|975
  6CFJ|1|2A|G|975|||A
  6CFJ|1|2A|C|976
  * 
6CFJ|1|2A|G|987
  6CFJ|1|2A|A|988
  6CFJ|1|2A|G|989
  6CFJ|1|2A|A|990
  6CFJ|1|2A|C|991
  * 
6CFJ|1|2A|G|1163
  6CFJ|1|2A|G|1164
  * 
6CFJ|1|2A|C|1185
  6CFJ|1|2A|G|1186
  6CFJ|1|2A|G|1187
  6CFJ|1|2A|U|1188
  6CFJ|1|2A|A|1189
  6CFJ|1|2A|G|1190
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 23
- 50S ribosomal protein L30
- Chain 28
- 50S ribosomal protein L35
- Chain 2B
- 5S ribosomal RNA; 5S rRNA
- Chain 2P
- 50S ribosomal protein L15
- Chain 2U
- 50S ribosomal protein L20
- Chain 2V
- 50S ribosomal protein L21
Coloring options: