3D structure

PDB id
6ENJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
6ENJ|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ENJ|1|A|C|817
6ENJ|1|A|G|818
6ENJ|1|A|A|819
6ENJ|1|A|A|820
6ENJ|1|A|A|821
6ENJ|1|A|G|822
*
6ENJ|1|A|C|835
6ENJ|1|A|G|836
6ENJ|1|A|C|837
*
6ENJ|1|A|G|942
6ENJ|1|A|A|943
6ENJ|1|A|C|944
6ENJ|1|A|A|945
6ENJ|1|A|C|946
*
6ENJ|1|A|G|971
6ENJ|1|A|A|972
6ENJ|1|A|A|973
6ENJ|1|A|G|974
6ENJ|1|A|A|975
6ENJ|1|A|G|976
*
6ENJ|1|A|C|987
6ENJ|1|A|A|988
6ENJ|1|A|G|989
6ENJ|1|A|A|990
6ENJ|1|A|C|991
*
6ENJ|1|A|G|1163
6ENJ|1|A|C|1164
*
6ENJ|1|A|G|1185
6ENJ|1|A|G|1186
6ENJ|1|A|G|1187
6ENJ|1|A|U|1188
6ENJ|1|A|A|1189
6ENJ|1|A|G|1190

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2208 s