J7_6FTI_001
3D structure
- PDB id
- 6FTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 6FTI|1|u|G|1854
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTI|1|u|C|1666
6FTI|1|u|G|1667
6FTI|1|u|A|1668
6FTI|1|u|A|1669
6FTI|1|u|G|1670
6FTI|1|u|U|1671
*
6FTI|1|u|A|1684
6FTI|1|u|G|1685
*
6FTI|1|u|U|1852
6FTI|1|u|G|1853
6FTI|1|u|G|1854
6FTI|1|u|G|1855
*
6FTI|1|u|C|1879
6FTI|1|u|G|1880
6FTI|1|u|C|1881
6FTI|1|u|U|1882
6FTI|1|u|G|1883
6FTI|1|u|C|1884
*
6FTI|1|u|G|1895
6FTI|1|u|A|1896
6FTI|1|u|A|1897
6FTI|1|u|C|1898
6FTI|1|u|G|1899
*
6FTI|1|u|C|2077
6FTI|1|u|C|2078
*
6FTI|1|u|G|2278
6FTI|1|u|A|2279
6FTI|1|u|G|2280
6FTI|1|u|U|2281
6FTI|1|u|A|2282
6FTI|1|u|G|2283
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain F
- uL30
- Chain L
- eL13
- Chain Q
- uL14
- Chain T
- eL21
- Chain a
- uL15
- Chain b
- 60S ribosomal protein L29
- Chain e
- eL32
- Chain f
- eL33
- Chain v
- 5S ribosomal RNA; 5S rRNA
Coloring options: