3D structure

PDB id
6GWT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
6GWT|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GWT|1|A|C|817
6GWT|1|A|G|818
6GWT|1|A|A|819
6GWT|1|A|A|820
6GWT|1|A|A|821
6GWT|1|A|G|822
*
6GWT|1|A|C|835
6GWT|1|A|G|836
6GWT|1|A|C|837
6GWT|1|A|C|838
*
6GWT|1|A|G|940
6GWT|1|A|A|941
6GWT|1|A|G|942
6GWT|1|A|A|943
6GWT|1|A|C|944
6GWT|1|A|A|945
6GWT|1|A|C|946
*
6GWT|1|A|G|971
6GWT|1|A|A|972
6GWT|1|A|A|973
6GWT|1|A|G|974
6GWT|1|A|A|975
6GWT|1|A|G|976
*
6GWT|1|A|C|987
6GWT|1|A|A|988
6GWT|1|A|G|989
6GWT|1|A|A|990
6GWT|1|A|C|991
*
6GWT|1|A|G|1163
6GWT|1|A|C|1164
*
6GWT|1|A|G|1185
6GWT|1|A|G|1186
6GWT|1|A|G|1187
6GWT|1|A|U|1188
6GWT|1|A|A|1189
6GWT|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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