J7_6GZQ_001
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG
- Length
- 32 nucleotides
- Bulged bases
- 6GZQ|1|A1|A|992, 6GZQ|1|A1|C|1022
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZQ|1|A1|C|866
6GZQ|1|A1|G|867
6GZQ|1|A1|A|868
6GZQ|1|A1|A|869
6GZQ|1|A1|A|870
6GZQ|1|A1|U|871
*
6GZQ|1|A1|A|884
6GZQ|1|A1|G|885
*
6GZQ|1|A1|U|990
6GZQ|1|A1|G|991
6GZQ|1|A1|A|992
6GZQ|1|A1|G|993
*
6GZQ|1|A1|C|1018
6GZQ|1|A1|G|1019
6GZQ|1|A1|A|1020
6GZQ|1|A1|G|1021
6GZQ|1|A1|C|1022
6GZQ|1|A1|G|1023
6GZQ|1|A1|C|1024
*
6GZQ|1|A1|G|1035
6GZQ|1|A1|A|1036
6GZQ|1|A1|G|1037
6GZQ|1|A1|A|1038
6GZQ|1|A1|C|1039
*
6GZQ|1|A1|G|1211
6GZQ|1|A1|G|1212
*
6GZQ|1|A1|C|1232
6GZQ|1|A1|G|1233
6GZQ|1|A1|G|1234
6GZQ|1|A1|U|1235
6GZQ|1|A1|A|1236
6GZQ|1|A1|G|1237
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain B1
- 5S ribosomal RNA; 5S rRNA
- Chain K1
- 50S ribosomal protein L15
- Chain P1
- 50S ribosomal protein L20
- Chain Q1
- 50S ribosomal protein L21
- Chain Y1
- 50S ribosomal protein L30
- Chain d1
- 50S ribosomal protein L35
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