J7_6H4N_001

3D structure

PDB id

6H4N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

6H4N|1|A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6H4N|1|A|C|8
6H4N|1|A|G|9
6H4N|1|A|A|10
6H4N|1|A|C|11
6H4N|1|A|U|12
6H4N|1|A|A|13
6H4N|1|A|A|14
6H4N|1|A|G|15
*
6H4N|1|A|U|525
6H4N|1|A|A|526
6H4N|1|A|C|527
6H4N|1|A|A|528
6H4N|1|A|A|529
6H4N|1|A|G|530
6H4N|1|A|C|531
*
6H4N|1|A|G|2018
6H4N|1|A|A|2019
6H4N|1|A|A|2020
6H4N|1|A|C|2021
6H4N|1|A|U|2022
6H4N|1|A|C|2023
*
6H4N|1|A|G|2040
6H4N|1|A|U|2041
6H4N|1|A|A|2042
6H4N|1|A|C|2043
*
6H4N|1|A|G|2625
6H4N|1|A|C|2626
6H4N|1|A|G|2627
6H4N|1|A|C|2628
6H4N|1|A|U|2629
6H4N|1|A|G|2630
*
6H4N|1|A|C|2788
6H4N|1|A|C|2789
*
6H4N|1|A|G|2894
6H4N|1|A|G|2895

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22