J7_6H4N_002

3D structure

PDB id

6H4N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG

Length

36 nucleotides

Bulged bases

6H4N|1|A|A|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6H4N|1|A|C|817
6H4N|1|A|G|818
6H4N|1|A|A|819
6H4N|1|A|A|820
6H4N|1|A|A|821
6H4N|1|A|G|822
*
6H4N|1|A|C|835
6H4N|1|A|G|836
6H4N|1|A|C|837
6H4N|1|A|C|838
*
6H4N|1|A|G|940
6H4N|1|A|A|941
6H4N|1|A|G|942
6H4N|1|A|A|943
6H4N|1|A|C|944
6H4N|1|A|A|945
6H4N|1|A|C|946
*
6H4N|1|A|G|971
6H4N|1|A|A|972
6H4N|1|A|A|973
6H4N|1|A|G|974
6H4N|1|A|A|975
6H4N|1|A|G|976
*
6H4N|1|A|C|987
6H4N|1|A|A|988
6H4N|1|A|G|989
6H4N|1|A|A|990
6H4N|1|A|C|991
*
6H4N|1|A|G|1163
6H4N|1|A|C|1164
*
6H4N|1|A|G|1185
6H4N|1|A|G|1186
6H4N|1|A|G|1187
6H4N|1|A|U|1188
6H4N|1|A|A|1189
6H4N|1|A|G|1190

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain B

5S ribosomal RNA; 5S rRNA

Chain L

50S ribosomal protein L15

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21

Chain Z

50S ribosomal protein L30