J7_6I7V_002

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGAAAGC*GCGCC*GAGACAC*GAAGAG*CAGACC*GGC*GGGUAG

Length

40 nucleotides

Bulged bases

6I7V|1|CA|A|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I7V|1|CA|C|817
6I7V|1|CA|G|818
6I7V|1|CA|A|819
6I7V|1|CA|A|820
6I7V|1|CA|A|821
6I7V|1|CA|G|822
6I7V|1|CA|C|823
*
6I7V|1|CA|G|834
6I7V|1|CA|C|835
6I7V|1|CA|G|836
6I7V|1|CA|C|837
6I7V|1|CA|C|838
*
6I7V|1|CA|G|940
6I7V|1|CA|A|941
6I7V|1|CA|G|942
6I7V|1|CA|A|943
6I7V|1|CA|C|944
6I7V|1|CA|A|945
6I7V|1|CA|C|946
*
6I7V|1|CA|G|971
6I7V|1|CA|A|972
6I7V|1|CA|A|973
6I7V|1|CA|G|974
6I7V|1|CA|A|975
6I7V|1|CA|G|976
*
6I7V|1|CA|C|987
6I7V|1|CA|A|988
6I7V|1|CA|G|989
6I7V|1|CA|A|990
6I7V|1|CA|C|991
6I7V|1|CA|C|992
*
6I7V|1|CA|G|1162
6I7V|1|CA|G|1163
6I7V|1|CA|C|1164
*
6I7V|1|CA|G|1185
6I7V|1|CA|G|1186
6I7V|1|CA|G|1187
6I7V|1|CA|U|1188
6I7V|1|CA|A|1189
6I7V|1|CA|G|1190

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain C0

50S ribosomal protein L30

Chain C4

50S ribosomal protein L35

Chain CB

5S ribosomal RNA; 5S rRNA

Chain CM

50S ribosomal protein L15

Chain CR

50S ribosomal protein L20

Chain CS

50S ribosomal protein L21

Chain CX

50S ribosomal protein L27