J7_6MTB_001
3D structure
- PDB id
- 6MTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAAAGU*AG*UGGG*CGCU(OMG)C*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 6MTB|1|5|G|1854
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6MTB|1|5|C|1666
6MTB|1|5|A|1667
6MTB|1|5|A|1668
6MTB|1|5|A|1669
6MTB|1|5|G|1670
6MTB|1|5|U|1671
*
6MTB|1|5|A|1684
6MTB|1|5|G|1685
*
6MTB|1|5|U|1852
6MTB|1|5|G|1853
6MTB|1|5|G|1854
6MTB|1|5|G|1855
*
6MTB|1|5|C|1879
6MTB|1|5|G|1880
6MTB|1|5|C|1881
6MTB|1|5|U|1882
6MTB|1|5|OMG|1883
6MTB|1|5|C|1884
*
6MTB|1|5|G|1895
6MTB|1|5|A|1896
6MTB|1|5|A|1897
6MTB|1|5|C|1898
6MTB|1|5|G|1899
*
6MTB|1|5|C|2077
6MTB|1|5|C|2078
*
6MTB|1|5|G|2278
6MTB|1|5|A|2279
6MTB|1|5|G|2280
6MTB|1|5|U|2281
6MTB|1|5|A|2282
6MTB|1|5|G|2283
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain C
- 60S ribosomal protein L4
- Chain F
- 60S ribosomal protein L7
- Chain L
- 60S ribosomal protein L13
- Chain Q
- 60S ribosomal protein L18
- Chain T
- 60S ribosomal protein L21
- Chain a
- 60S ribosomal protein L27a
- Chain b
- 60S ribosomal protein L29
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L35a
Coloring options: