J7_6NDK_002
3D structure
- PDB id
- 6NDK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ASLSufA6 A37.5 bound to the 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- CGAAAU*AGC*GUGAG*CGAGCGCG*CGAGAC*GG*CGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 6NDK|1|RA|A|945, 6NDK|1|RA|C|975|||A
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6NDK|1|RA|C|817
6NDK|1|RA|G|818
6NDK|1|RA|A|819
6NDK|1|RA|A|820
6NDK|1|RA|A|821
6NDK|1|RA|U|822
*
6NDK|1|RA|A|835
6NDK|1|RA|G|836
6NDK|1|RA|C|837
*
6NDK|1|RA|G|942
6NDK|1|RA|U|943
6NDK|1|RA|G|944
6NDK|1|RA|A|945
6NDK|1|RA|G|946
*
6NDK|1|RA|C|971
6NDK|1|RA|G|972
6NDK|1|RA|A|973
6NDK|1|RA|G|974
6NDK|1|RA|C|975|||A
6NDK|1|RA|G|975|||B
6NDK|1|RA|C|976
6NDK|1|RA|G|977
*
6NDK|1|RA|C|986
6NDK|1|RA|G|987
6NDK|1|RA|A|988
6NDK|1|RA|G|989
6NDK|1|RA|A|990
6NDK|1|RA|C|991
*
6NDK|1|RA|G|1163
6NDK|1|RA|G|1164
*
6NDK|1|RA|C|1185
6NDK|1|RA|G|1186
6NDK|1|RA|G|1187
6NDK|1|RA|U|1188
6NDK|1|RA|A|1189
6NDK|1|RA|G|1190
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R3
- 50S ribosomal protein L30
- Chain R8
- 50S ribosomal protein L35
- Chain RB
- 5S ribosomal RNA; 5S rRNA
- Chain RP
- 50S ribosomal protein L15
- Chain RU
- 50S ribosomal protein L20
- Chain RV
- 50S ribosomal protein L21
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