J7_6NQB_002
3D structure
- PDB id
- 6NQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAAG*CGGACGGGUGAGUAAUGU*AUG*CUAG*CCACAC*GAC*GGCAG
- Length
- 43 nucleotides
- Bulged bases
- 6NQB|1|A|A|109, 6NQB|1|A|U|121, 6NQB|1|A|C|352, 6NQB|1|A|A|353
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6NQB|1|A|C|58
6NQB|1|A|A|59
6NQB|1|A|A|60
6NQB|1|A|G|61
*
6NQB|1|A|C|106
6NQB|1|A|G|107
6NQB|1|A|G|108
6NQB|1|A|A|109
6NQB|1|A|C|110
6NQB|1|A|G|111
6NQB|1|A|G|112
6NQB|1|A|G|113
6NQB|1|A|U|114
6NQB|1|A|G|115
6NQB|1|A|A|116
6NQB|1|A|G|117
6NQB|1|A|U|118
6NQB|1|A|A|119
6NQB|1|A|A|120
6NQB|1|A|U|121
6NQB|1|A|G|122
6NQB|1|A|U|123
*
6NQB|1|A|A|238
6NQB|1|A|U|239
6NQB|1|A|G|240
*
6NQB|1|A|C|286
6NQB|1|A|U|287
6NQB|1|A|A|288
6NQB|1|A|G|289
*
6NQB|1|A|C|311
6NQB|1|A|C|312
6NQB|1|A|A|313
6NQB|1|A|C|314
6NQB|1|A|A|315
6NQB|1|A|C|316
*
6NQB|1|A|G|337
6NQB|1|A|A|338
6NQB|1|A|C|339
*
6NQB|1|A|G|350
6NQB|1|A|G|351
6NQB|1|A|C|352
6NQB|1|A|A|353
6NQB|1|A|G|354
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain P
- 30S RIBOSOMAL PROTEIN bS16
- Chain Q
- 30S ribosomal protein S17
- Chain T
- 30S ribosomal protein S20
Coloring options: