J7_6OFX_002

3D structure

PDB id

6OFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-rotated ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG

Length

36 nucleotides

Bulged bases

6OFX|1|1|A|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OFX|1|1|C|817
6OFX|1|1|G|818
6OFX|1|1|A|819
6OFX|1|1|A|820
6OFX|1|1|A|821
6OFX|1|1|G|822
*
6OFX|1|1|C|835
6OFX|1|1|G|836
6OFX|1|1|C|837
6OFX|1|1|C|838
*
6OFX|1|1|G|940
6OFX|1|1|A|941
6OFX|1|1|G|942
6OFX|1|1|A|943
6OFX|1|1|C|944
6OFX|1|1|A|945
6OFX|1|1|C|946
*
6OFX|1|1|G|971
6OFX|1|1|A|972
6OFX|1|1|A|973
6OFX|1|1|G|974
6OFX|1|1|A|975
6OFX|1|1|G|976
*
6OFX|1|1|C|987
6OFX|1|1|A|988
6OFX|1|1|G|989
6OFX|1|1|A|990
6OFX|1|1|C|991
*
6OFX|1|1|G|1163
6OFX|1|1|C|1164
*
6OFX|1|1|G|1185
6OFX|1|1|G|1186
6OFX|1|1|G|1187
6OFX|1|1|U|1188
6OFX|1|1|A|1189
6OFX|1|1|G|1190

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 2

5S ribosomal RNA; 5S rRNA

Chain E

50S ribosomal protein L35

Chain l

50S ribosomal protein L15

Chain q

50S ribosomal protein L20

Chain r

50S ribosomal protein L21

Chain z

50S ribosomal protein L30