3D structure

PDB id
6OSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated 70S complex at 60 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
6OSK|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OSK|1|1|C|817
6OSK|1|1|G|818
6OSK|1|1|A|819
6OSK|1|1|A|820
6OSK|1|1|A|821
6OSK|1|1|G|822
*
6OSK|1|1|C|835
6OSK|1|1|G|836
6OSK|1|1|C|837
*
6OSK|1|1|G|942
6OSK|1|1|A|943
6OSK|1|1|C|944
6OSK|1|1|A|945
6OSK|1|1|C|946
*
6OSK|1|1|G|971
6OSK|1|1|A|972
6OSK|1|1|A|973
6OSK|1|1|G|974
6OSK|1|1|A|975
6OSK|1|1|G|976
*
6OSK|1|1|C|987
6OSK|1|1|A|988
6OSK|1|1|G|989
6OSK|1|1|A|990
6OSK|1|1|C|991
*
6OSK|1|1|G|1163
6OSK|1|1|C|1164
*
6OSK|1|1|G|1185
6OSK|1|1|G|1186
6OSK|1|1|G|1187
6OSK|1|1|U|1188
6OSK|1|1|A|1189
6OSK|1|1|G|1190

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30
Chain e
50S ribosomal protein L35

Coloring options:

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