3D structure

PDB id
6OSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated 70S complex at 60 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
6OSK|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OSK|1|1|C|8
6OSK|1|1|G|9
6OSK|1|1|A|10
6OSK|1|1|C|11
6OSK|1|1|U|12
6OSK|1|1|A|13
6OSK|1|1|A|14
6OSK|1|1|G|15
*
6OSK|1|1|U|525
6OSK|1|1|A|526
6OSK|1|1|C|527
6OSK|1|1|A|528
6OSK|1|1|A|529
6OSK|1|1|G|530
6OSK|1|1|C|531
*
6OSK|1|1|G|2018
6OSK|1|1|A|2019
6OSK|1|1|A|2020
6OSK|1|1|C|2021
6OSK|1|1|U|2022
6OSK|1|1|C|2023
*
6OSK|1|1|G|2040
6OSK|1|1|U|2041
6OSK|1|1|A|2042
6OSK|1|1|C|2043
*
6OSK|1|1|G|2625
6OSK|1|1|C|2626
6OSK|1|1|G|2627
6OSK|1|1|C|2628
6OSK|1|1|U|2629
6OSK|1|1|G|2630
*
6OSK|1|1|C|2788
6OSK|1|1|C|2789
*
6OSK|1|1|G|2894
6OSK|1|1|G|2895

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain S
50S ribosomal protein L22
Chain b
50S ribosomal protein L32

Coloring options:

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