3D structure

PDB id
6OSQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated state bound Release complex 70S at long incubation time point
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
6OSQ|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OSQ|1|1|C|817
6OSQ|1|1|G|818
6OSQ|1|1|A|819
6OSQ|1|1|A|820
6OSQ|1|1|A|821
6OSQ|1|1|G|822
*
6OSQ|1|1|C|835
6OSQ|1|1|G|836
6OSQ|1|1|C|837
*
6OSQ|1|1|G|942
6OSQ|1|1|A|943
6OSQ|1|1|C|944
6OSQ|1|1|A|945
6OSQ|1|1|C|946
*
6OSQ|1|1|G|971
6OSQ|1|1|A|972
6OSQ|1|1|A|973
6OSQ|1|1|G|974
6OSQ|1|1|A|975
6OSQ|1|1|G|976
*
6OSQ|1|1|C|987
6OSQ|1|1|A|988
6OSQ|1|1|G|989
6OSQ|1|1|A|990
6OSQ|1|1|C|991
*
6OSQ|1|1|G|1163
6OSQ|1|1|C|1164
*
6OSQ|1|1|G|1185
6OSQ|1|1|G|1186
6OSQ|1|1|G|1187
6OSQ|1|1|U|1188
6OSQ|1|1|A|1189
6OSQ|1|1|G|1190

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30
Chain e
50S ribosomal protein L35

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0988 s