3D structure

PDB id
6OT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound Release complex 70S at 24 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
6OT3|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OT3|1|1|C|8
6OT3|1|1|G|9
6OT3|1|1|A|10
6OT3|1|1|C|11
6OT3|1|1|U|12
6OT3|1|1|A|13
6OT3|1|1|A|14
6OT3|1|1|G|15
*
6OT3|1|1|U|525
6OT3|1|1|A|526
6OT3|1|1|C|527
6OT3|1|1|A|528
6OT3|1|1|A|529
6OT3|1|1|G|530
6OT3|1|1|C|531
*
6OT3|1|1|G|2018
6OT3|1|1|A|2019
6OT3|1|1|A|2020
6OT3|1|1|C|2021
6OT3|1|1|U|2022
6OT3|1|1|C|2023
*
6OT3|1|1|G|2040
6OT3|1|1|U|2041
6OT3|1|1|A|2042
6OT3|1|1|C|2043
*
6OT3|1|1|G|2625
6OT3|1|1|C|2626
6OT3|1|1|G|2627
6OT3|1|1|C|2628
6OT3|1|1|U|2629
6OT3|1|1|G|2630
*
6OT3|1|1|C|2788
6OT3|1|1|C|2789
*
6OT3|1|1|G|2894
6OT3|1|1|G|2895

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain S
50S ribosomal protein L22
Chain b
50S ribosomal protein L32

Coloring options:

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