3D structure

PDB id
6OT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound Release complex 70S at 24 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
6OT3|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OT3|1|1|C|817
6OT3|1|1|G|818
6OT3|1|1|A|819
6OT3|1|1|A|820
6OT3|1|1|A|821
6OT3|1|1|G|822
*
6OT3|1|1|C|835
6OT3|1|1|G|836
6OT3|1|1|C|837
*
6OT3|1|1|G|942
6OT3|1|1|A|943
6OT3|1|1|C|944
6OT3|1|1|A|945
6OT3|1|1|C|946
*
6OT3|1|1|G|971
6OT3|1|1|A|972
6OT3|1|1|A|973
6OT3|1|1|G|974
6OT3|1|1|A|975
6OT3|1|1|G|976
*
6OT3|1|1|C|987
6OT3|1|1|A|988
6OT3|1|1|G|989
6OT3|1|1|A|990
6OT3|1|1|C|991
*
6OT3|1|1|G|1163
6OT3|1|1|C|1164
*
6OT3|1|1|G|1185
6OT3|1|1|G|1186
6OT3|1|1|G|1187
6OT3|1|1|U|1188
6OT3|1|1|A|1189
6OT3|1|1|G|1190

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30
Chain e
50S ribosomal protein L35

Coloring options:

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