3D structure

PDB id
6OUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound 70S complex at long incubation time
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
6OUO|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OUO|1|1|C|8
6OUO|1|1|G|9
6OUO|1|1|A|10
6OUO|1|1|C|11
6OUO|1|1|U|12
6OUO|1|1|A|13
6OUO|1|1|A|14
6OUO|1|1|G|15
*
6OUO|1|1|U|525
6OUO|1|1|A|526
6OUO|1|1|C|527
6OUO|1|1|A|528
6OUO|1|1|A|529
6OUO|1|1|G|530
6OUO|1|1|C|531
*
6OUO|1|1|G|2018
6OUO|1|1|A|2019
6OUO|1|1|A|2020
6OUO|1|1|C|2021
6OUO|1|1|U|2022
6OUO|1|1|C|2023
*
6OUO|1|1|G|2040
6OUO|1|1|U|2041
6OUO|1|1|A|2042
6OUO|1|1|C|2043
*
6OUO|1|1|G|2625
6OUO|1|1|C|2626
6OUO|1|1|G|2627
6OUO|1|1|C|2628
6OUO|1|1|U|2629
6OUO|1|1|G|2630
*
6OUO|1|1|C|2788
6OUO|1|1|C|2789
*
6OUO|1|1|G|2894
6OUO|1|1|G|2895

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain S
50S ribosomal protein L22
Chain b
50S ribosomal protein L32

Coloring options:

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