J7_6R6G_001
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 6R6G|1|5|G|1391
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6R6G|1|5|C|1226
6R6G|1|5|A|1227
6R6G|1|5|A|1228
6R6G|1|5|A|1229
6R6G|1|5|G|1230
6R6G|1|5|U|1231
*
6R6G|1|5|A|1244
6R6G|1|5|G|1245
*
6R6G|1|5|U|1389
6R6G|1|5|G|1390
6R6G|1|5|G|1391
6R6G|1|5|G|1392
*
6R6G|1|5|C|1416
6R6G|1|5|G|1417
6R6G|1|5|C|1418
6R6G|1|5|U|1419
6R6G|1|5|G|1420
6R6G|1|5|C|1421
*
6R6G|1|5|G|1432
6R6G|1|5|A|1433
6R6G|1|5|A|1434
6R6G|1|5|C|1435
6R6G|1|5|G|1436
*
6R6G|1|5|C|1614
6R6G|1|5|C|1615
*
6R6G|1|5|G|1671
6R6G|1|5|A|1672
6R6G|1|5|G|1673
6R6G|1|5|U|1674
6R6G|1|5|A|1675
6R6G|1|5|G|1676
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain C
- uL4
- Chain F
- uL30
- Chain L
- 60S ribosomal protein L13
- Chain Q
- eL18
- Chain T
- eL21
- Chain a
- uL15
- Chain b
- eL29
- Chain e
- eL32
- Chain f
- eL33
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