J7_6SPB_002
3D structure
- PDB id
- 6SPB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAAAG*CAGAC*GG*CGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 6SPB|1|A|A|935
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SPB|1|A|C|807
6SPB|1|A|G|808
6SPB|1|A|A|809
6SPB|1|A|A|810
6SPB|1|A|A|811
6SPB|1|A|G|812
*
6SPB|1|A|C|825
6SPB|1|A|G|826
6SPB|1|A|C|827
6SPB|1|A|C|828
*
6SPB|1|A|G|930
6SPB|1|A|A|931
6SPB|1|A|G|932
6SPB|1|A|A|933
6SPB|1|A|C|934
6SPB|1|A|A|935
6SPB|1|A|C|936
*
6SPB|1|A|G|961
6SPB|1|A|A|962
6SPB|1|A|A|963
6SPB|1|A|A|964
6SPB|1|A|A|965
6SPB|1|A|G|966
*
6SPB|1|A|C|977
6SPB|1|A|A|978
6SPB|1|A|G|979
6SPB|1|A|A|980
6SPB|1|A|C|981
*
6SPB|1|A|G|1154
6SPB|1|A|G|1155
*
6SPB|1|A|C|1172
6SPB|1|A|G|1173
6SPB|1|A|G|1174
6SPB|1|A|U|1175
6SPB|1|A|A|1176
6SPB|1|A|G|1177
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 5
- 50S ribosomal protein L35
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain L
- 50S ribosomal protein L15
- Chain Q
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L21
- Chain Z
- 50S ribosomal protein L30
Coloring options: