J7_6SWA_001
3D structure
- PDB id
- 6SWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAGUUU*AUAGC*GUGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 37 nucleotides
- Bulged bases
- 6SWA|1|q|G|1835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SWA|1|q|C|1648
6SWA|1|q|G|1649
6SWA|1|q|A|1650
6SWA|1|q|A|1651
6SWA|1|q|G|1652
6SWA|1|q|U|1653
6SWA|1|q|U|1654
6SWA|1|q|U|1655
*
6SWA|1|q|A|1664
6SWA|1|q|U|1665
6SWA|1|q|A|1666
6SWA|1|q|G|1667
6SWA|1|q|C|1668
*
6SWA|1|q|G|1832
6SWA|1|q|U|1833
6SWA|1|q|G|1834
6SWA|1|q|G|1835
6SWA|1|q|G|1836
*
6SWA|1|q|C|1860
6SWA|1|q|G|1861
6SWA|1|q|C|1862
6SWA|1|q|U|1863
6SWA|1|q|G|1864
6SWA|1|q|C|1865
*
6SWA|1|q|G|1876
6SWA|1|q|A|1877
6SWA|1|q|A|1878
6SWA|1|q|C|1879
6SWA|1|q|G|1880
*
6SWA|1|q|C|2058
6SWA|1|q|C|2059
*
6SWA|1|q|G|2257
6SWA|1|q|A|2258
6SWA|1|q|G|2259
6SWA|1|q|U|2260
6SWA|1|q|A|2261
6SWA|1|q|G|2262
Current chains
- Chain q
- 28S ribosomal RNA (3612-MER)
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain F
- 60S ribosomal protein L7
- Chain K
- 60S ribosomal protein L13
- Chain P
- 60S ribosomal protein L18
- Chain R
- 60S ribosomal protein L21
- Chain Y
- 60S ribosomal protein L27a
- Chain Z
- 60S ribosomal protein L29
- Chain c
- 60S ribosomal protein L32
- Chain d
- 60S ribosomal protein L35a
- Chain s
- 5S ribosomal RNA; 5S rRNA
Coloring options: