J7_6TBV_002
3D structure
- PDB id
- 6TBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 6TBV|1|23S1|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6TBV|1|23S1|C|817
6TBV|1|23S1|G|818
6TBV|1|23S1|A|819
6TBV|1|23S1|A|820
6TBV|1|23S1|A|821
6TBV|1|23S1|G|822
*
6TBV|1|23S1|C|835
6TBV|1|23S1|G|836
6TBV|1|23S1|C|837
6TBV|1|23S1|C|838
*
6TBV|1|23S1|G|940
6TBV|1|23S1|A|941
6TBV|1|23S1|G|942
6TBV|1|23S1|A|943
6TBV|1|23S1|C|944
6TBV|1|23S1|A|945
6TBV|1|23S1|C|946
*
6TBV|1|23S1|G|971
6TBV|1|23S1|A|972
6TBV|1|23S1|A|973
6TBV|1|23S1|G|974
6TBV|1|23S1|A|975
6TBV|1|23S1|G|976
*
6TBV|1|23S1|C|987
6TBV|1|23S1|A|988
6TBV|1|23S1|G|989
6TBV|1|23S1|A|990
6TBV|1|23S1|C|991
*
6TBV|1|23S1|G|1163
6TBV|1|23S1|C|1164
*
6TBV|1|23S1|G|1185
6TBV|1|23S1|G|1186
6TBV|1|23S1|G|1187
6TBV|1|23S1|U|1188
6TBV|1|23S1|A|1189
6TBV|1|23S1|G|1190
Current chains
- Chain 23S1
- 23S rRNA
Nearby chains
- Chain 05S1
- 5S ribosomal RNA; 5S rRNA
- Chain L151
- 50S ribosomal protein L15
- Chain L201
- 50S ribosomal protein L20
- Chain L211
- 50S ribosomal protein L21
- Chain L301
- 50S ribosomal protein L30
- Chain L351
- 50S ribosomal protein L35
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