J7_6TNN_003
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- UUAGAAAG*UACAAGU*AUAGUA*UUAC*GCGCAG*CC*GA
- Length
- 35 nucleotides
- Bulged bases
- 6TNN|1|U|G|574, 6TNN|1|U|G|2048
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6TNN|1|U|U|6
6TNN|1|U|U|7
6TNN|1|U|A|8
6TNN|1|U|G|9
6TNN|1|U|A|10
6TNN|1|U|A|11
6TNN|1|U|A|12
6TNN|1|U|G|13
*
6TNN|1|U|U|569
6TNN|1|U|A|570
6TNN|1|U|C|571
6TNN|1|U|A|572
6TNN|1|U|A|573
6TNN|1|U|G|574
6TNN|1|U|U|575
*
6TNN|1|U|A|2045
6TNN|1|U|U|2046
6TNN|1|U|A|2047
6TNN|1|U|G|2048
6TNN|1|U|U|2049
6TNN|1|U|A|2050
*
6TNN|1|U|U|2067
6TNN|1|U|U|2068
6TNN|1|U|A|2069
6TNN|1|U|C|2070
*
6TNN|1|U|G|2652
6TNN|1|U|C|2653
6TNN|1|U|G|2654
6TNN|1|U|C|2655
6TNN|1|U|A|2656
6TNN|1|U|G|2657
*
6TNN|1|U|C|2815
6TNN|1|U|C|2816
*
6TNN|1|U|G|2916
6TNN|1|U|A|2917
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain I
- Mini-ribonuclease 3
- Chain X
- 50S ribosomal protein L3
- Chain c
- 50S ribosomal protein L13
- Chain j
- 50S ribosomal protein L20
- Chain l
- 50S ribosomal protein L22
- Chain p
- 50S ribosomal protein L32
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