3D structure

PDB id
6V3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.82 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAG*CAAGAG*CAGAC*GA*UGGUAG
Length
36 nucleotides
Bulged bases
6V3A|1|AN1|A|942
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6V3A|1|AN1|C|815
6V3A|1|AN1|G|816
6V3A|1|AN1|A|817
6V3A|1|AN1|A|818
6V3A|1|AN1|A|819
6V3A|1|AN1|G|820
*
6V3A|1|AN1|C|833
6V3A|1|AN1|G|834
6V3A|1|AN1|C|835
6V3A|1|AN1|C|836
*
6V3A|1|AN1|G|937
6V3A|1|AN1|A|938
6V3A|1|AN1|G|939
6V3A|1|AN1|A|940
6V3A|1|AN1|C|941
6V3A|1|AN1|A|942
6V3A|1|AN1|G|943
*
6V3A|1|AN1|C|968
6V3A|1|AN1|A|969
6V3A|1|AN1|A|970
6V3A|1|AN1|G|971
6V3A|1|AN1|A|972
6V3A|1|AN1|G|973
*
6V3A|1|AN1|C|984
6V3A|1|AN1|A|985
6V3A|1|AN1|G|986
6V3A|1|AN1|A|987
6V3A|1|AN1|C|988
*
6V3A|1|AN1|G|1161
6V3A|1|AN1|A|1162
*
6V3A|1|AN1|U|1180
6V3A|1|AN1|G|1181
6V3A|1|AN1|G|1182
6V3A|1|AN1|U|1183
6V3A|1|AN1|A|1184
6V3A|1|AN1|G|1185

Current chains

Chain AN1
23s ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain K
50S ribosomal protein L15
Chain P
50S ribosomal protein L20
Chain Q
50S ribosomal protein L21
Chain Y
50S ribosomal protein L30

Coloring options:

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