J7_6V3B_001

3D structure

PDB id

6V3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

UAAUUAAG*UACAAGC*GAAAUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

6V3B|1|AN1|A|2017

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V3B|1|AN1|U|15
6V3B|1|AN1|A|16
6V3B|1|AN1|A|17
6V3B|1|AN1|U|18
6V3B|1|AN1|U|19
6V3B|1|AN1|A|20
6V3B|1|AN1|A|21
6V3B|1|AN1|G|22
*
6V3B|1|AN1|U|524
6V3B|1|AN1|A|525
6V3B|1|AN1|C|526
6V3B|1|AN1|A|527
6V3B|1|AN1|A|528
6V3B|1|AN1|G|529
6V3B|1|AN1|C|530
*
6V3B|1|AN1|G|2014
6V3B|1|AN1|A|2015
6V3B|1|AN1|A|2016
6V3B|1|AN1|A|2017
6V3B|1|AN1|U|2018
6V3B|1|AN1|C|2019
*
6V3B|1|AN1|G|2036
6V3B|1|AN1|U|2037
6V3B|1|AN1|A|2038
6V3B|1|AN1|C|2039
*
6V3B|1|AN1|G|2621
6V3B|1|AN1|C|2622
6V3B|1|AN1|G|2623
6V3B|1|AN1|C|2624
6V3B|1|AN1|U|2625
6V3B|1|AN1|G|2626
*
6V3B|1|AN1|C|2784
6V3B|1|AN1|C|2785
*
6V3B|1|AN1|G|2890
6V3B|1|AN1|G|2891

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain I

50S ribosomal protein L13

Chain P

50S ribosomal protein L20

Chain R

50S ribosomal protein L22

Chain Z

50S ribosomal protein L32