3D structure

PDB id
6WNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
6WNW|1|4|C|2149
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6WNW|1|4|C|8
6WNW|1|4|G|9
6WNW|1|4|A|10
6WNW|1|4|C|11
6WNW|1|4|U|12
6WNW|1|4|A|13
6WNW|1|4|A|14
6WNW|1|4|G|15
*
6WNW|1|4|U|525
6WNW|1|4|A|526
6WNW|1|4|C|527
6WNW|1|4|A|528
6WNW|1|4|A|529
6WNW|1|4|G|530
6WNW|1|4|C|531
*
6WNW|1|4|G|2146
6WNW|1|4|A|2147
6WNW|1|4|A|2148
6WNW|1|4|C|2149
6WNW|1|4|U|2150
6WNW|1|4|C|2151
*
6WNW|1|4|G|2168
6WNW|1|4|U|2169
6WNW|1|4|A|2170
6WNW|1|4|C|2171
*
6WNW|1|4|G|2753
6WNW|1|4|C|2754
6WNW|1|4|G|2755
6WNW|1|4|C|2756
6WNW|1|4|U|2757
6WNW|1|4|G|2758
*
6WNW|1|4|C|2916
6WNW|1|4|C|2917
*
6WNW|1|4|G|3022
6WNW|1|4|G|3023

Current chains

Chain 4
23s-5s joint ribosomal RNA

Nearby chains

Chain B
50S ribosomal protein L32
Chain c
50S ribosomal protein L3
Chain j
50S ribosomal protein L13
Chain q
50S ribosomal protein L20
Chain s
50S ribosomal protein L22

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.365 s