J7_6XHW_003

3D structure

PDB id

6XHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG

Length

32 nucleotides

Bulged bases

6XHW|1|2A|A|945, 6XHW|1|2A|C|975

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHW|1|2A|C|817
6XHW|1|2A|G|818
6XHW|1|2A|A|819
6XHW|1|2A|A|820
6XHW|1|2A|A|821
6XHW|1|2A|U|822
*
6XHW|1|2A|A|835
6XHW|1|2A|G|836
*
6XHW|1|2A|U|943
6XHW|1|2A|G|944
6XHW|1|2A|A|945
6XHW|1|2A|G|946
*
6XHW|1|2A|C|971
6XHW|1|2A|G|972
6XHW|1|2A|A|973
6XHW|1|2A|G|974
6XHW|1|2A|C|975
6XHW|1|2A|G|975|||A
6XHW|1|2A|C|976
*
6XHW|1|2A|G|987
6XHW|1|2A|A|988
6XHW|1|2A|G|989
6XHW|1|2A|A|990
6XHW|1|2A|C|991
*
6XHW|1|2A|G|1163
6XHW|1|2A|G|1164
*
6XHW|1|2A|C|1185
6XHW|1|2A|G|1186
6XHW|1|2A|G|1187
6XHW|1|2A|U|1188
6XHW|1|2A|A|1189
6XHW|1|2A|G|1190

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 23

50S ribosomal protein L30

Chain 28

50S ribosomal protein L35

Chain 2B

5S ribosomal RNA; 5S rRNA

Chain 2P

50S ribosomal protein L15

Chain 2U

50S ribosomal protein L20

Chain 2V

50S ribosomal protein L21