J7_6XYW_001
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CGAAAU*AGC*GACAG*CGAGAG*CAGAU*AG*CAGUAG
- Length
- 33 nucleotides
- Bulged bases
- 6XYW|1|1|A|1092
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XYW|1|1|C|961
6XYW|1|1|G|962
6XYW|1|1|A|963
6XYW|1|1|A|964
6XYW|1|1|A|965
6XYW|1|1|U|966
*
6XYW|1|1|A|979
6XYW|1|1|G|980
6XYW|1|1|C|981
*
6XYW|1|1|G|1089
6XYW|1|1|A|1090
6XYW|1|1|C|1091
6XYW|1|1|A|1092
6XYW|1|1|G|1093
*
6XYW|1|1|C|1120
6XYW|1|1|G|1121
6XYW|1|1|A|1122
6XYW|1|1|G|1123
6XYW|1|1|A|1124
6XYW|1|1|G|1125
*
6XYW|1|1|C|1136
6XYW|1|1|A|1137
6XYW|1|1|G|1138
6XYW|1|1|A|1139
6XYW|1|1|U|1140
*
6XYW|1|1|A|1313
6XYW|1|1|G|1314
*
6XYW|1|1|C|1341
6XYW|1|1|A|1342
6XYW|1|1|G|1343
6XYW|1|1|U|1344
6XYW|1|1|A|1345
6XYW|1|1|G|1346
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain 3
- RNA (118-MER)
- Chain AD
- Ribosomal protein L35
- Chain AH
- Mitochondrial ribosomal protein L51/S25/CI-B8 family protein
- Chain AL
- Uncharacterized protein At1g27435/F17L21.30
- Chain Al
- Ribosomal protein L18e/L15 superfamily protein
- Chain Aq
- 50S ribosomal protein L20
- Chain Ar
- 50S ribosomal protein L21, mitochondrial
- Chain Az
- At5g55140
Coloring options: