J7_6YLG_001
3D structure
- PDB id
- 6YLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAAGUUU*AUAG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 35 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YLG|1|1|C|949
6YLG|1|1|G|950
6YLG|1|1|A|951
6YLG|1|1|A|952
6YLG|1|1|G|953
6YLG|1|1|U|954
6YLG|1|1|U|955
6YLG|1|1|U|956
*
6YLG|1|1|A|965
6YLG|1|1|U|966
6YLG|1|1|A|967
6YLG|1|1|G|968
*
6YLG|1|1|U|1114
6YLG|1|1|G|1115
6YLG|1|1|G|1116
6YLG|1|1|G|1117
*
6YLG|1|1|C|1141
6YLG|1|1|G|1142
6YLG|1|1|A|1143
6YLG|1|1|U|1144
6YLG|1|1|G|1145
6YLG|1|1|C|1146
*
6YLG|1|1|G|1157
6YLG|1|1|A|1158
6YLG|1|1|A|1159
6YLG|1|1|C|1160
6YLG|1|1|G|1161
*
6YLG|1|1|C|1338
6YLG|1|1|C|1339
*
6YLG|1|1|G|1365
6YLG|1|1|A|1366
6YLG|1|1|G|1367
6YLG|1|1|U|1368
6YLG|1|1|A|1369
6YLG|1|1|G|1370
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain C
- 60S ribosomal protein L4-A
- Chain F
- 60S ribosomal protein L7-A
- Chain Q
- 60S ribosomal protein L18-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
- Chain m
- Nucleolar GTP-binding protein 2
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