J7_6YSI_001
3D structure
- PDB id
- 6YSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UAAUUAAG*UACAAGC*GAAAUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 6YSI|1|1|A|2010
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YSI|1|1|U|8
6YSI|1|1|A|9
6YSI|1|1|A|10
6YSI|1|1|U|11
6YSI|1|1|U|12
6YSI|1|1|A|13
6YSI|1|1|A|14
6YSI|1|1|G|15
*
6YSI|1|1|U|517
6YSI|1|1|A|518
6YSI|1|1|C|519
6YSI|1|1|A|520
6YSI|1|1|A|521
6YSI|1|1|G|522
6YSI|1|1|C|523
*
6YSI|1|1|G|2007
6YSI|1|1|A|2008
6YSI|1|1|A|2009
6YSI|1|1|A|2010
6YSI|1|1|U|2011
6YSI|1|1|C|2012
*
6YSI|1|1|G|2029
6YSI|1|1|U|2030
6YSI|1|1|A|2031
6YSI|1|1|C|2032
*
6YSI|1|1|G|2614
6YSI|1|1|C|2615
6YSI|1|1|G|2616
6YSI|1|1|C|2617
6YSI|1|1|U|2618
6YSI|1|1|G|2619
*
6YSI|1|1|C|2777
6YSI|1|1|C|2778
*
6YSI|1|1|G|2883
6YSI|1|1|G|2884
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain F
- 50S ribosomal protein L13
- Chain M
- 50S ribosomal protein L20
- Chain O
- 50S ribosomal protein L22
- Chain X
- 50S ribosomal protein L32
Coloring options: