J7_6YSI_002
3D structure
- PDB id
- 6YSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAG*CAAGAG*CAGAC*GA*UGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 6YSI|1|1|A|935
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YSI|1|1|C|808
6YSI|1|1|G|809
6YSI|1|1|A|810
6YSI|1|1|A|811
6YSI|1|1|A|812
6YSI|1|1|G|813
*
6YSI|1|1|C|826
6YSI|1|1|G|827
6YSI|1|1|C|828
6YSI|1|1|C|829
*
6YSI|1|1|G|930
6YSI|1|1|A|931
6YSI|1|1|G|932
6YSI|1|1|A|933
6YSI|1|1|C|934
6YSI|1|1|A|935
6YSI|1|1|G|936
*
6YSI|1|1|C|961
6YSI|1|1|A|962
6YSI|1|1|A|963
6YSI|1|1|G|964
6YSI|1|1|A|965
6YSI|1|1|G|966
*
6YSI|1|1|C|977
6YSI|1|1|A|978
6YSI|1|1|G|979
6YSI|1|1|A|980
6YSI|1|1|C|981
*
6YSI|1|1|G|1154
6YSI|1|1|A|1155
*
6YSI|1|1|U|1173
6YSI|1|1|G|1174
6YSI|1|1|G|1175
6YSI|1|1|U|1176
6YSI|1|1|A|1177
6YSI|1|1|G|1178
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain H
- 50S ribosomal protein L15
- Chain M
- 50S ribosomal protein L20
- Chain N
- 50S ribosomal protein L21
- Chain V
- 50S ribosomal protein L30
- Chain a
- 50S ribosomal protein L35
Coloring options: