J7_6YSS_001
3D structure
- PDB id
- 6YSS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 6YSS|1|A|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YSS|1|A|C|8
6YSS|1|A|G|9
6YSS|1|A|A|10
6YSS|1|A|C|11
6YSS|1|A|U|12
6YSS|1|A|A|13
6YSS|1|A|A|14
6YSS|1|A|G|15
*
6YSS|1|A|U|525
6YSS|1|A|A|526
6YSS|1|A|C|527
6YSS|1|A|A|528
6YSS|1|A|A|529
6YSS|1|A|G|530
6YSS|1|A|C|531
*
6YSS|1|A|G|2018
6YSS|1|A|A|2019
6YSS|1|A|A|2020
6YSS|1|A|C|2021
6YSS|1|A|U|2022
6YSS|1|A|C|2023
*
6YSS|1|A|G|2040
6YSS|1|A|U|2041
6YSS|1|A|A|2042
6YSS|1|A|C|2043
*
6YSS|1|A|G|2625
6YSS|1|A|C|2626
6YSS|1|A|G|2627
6YSS|1|A|C|2628
6YSS|1|A|U|2629
6YSS|1|A|G|2630
*
6YSS|1|A|C|2788
6YSS|1|A|C|2789
*
6YSS|1|A|G|2894
6YSS|1|A|G|2895
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
- Chain Q
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L21
- Chain S
- 50S ribosomal protein L22
Coloring options: