J7_6Z1P_002
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGAAAC*GGUGUUAUUUUUUA*UUAGAUAAUAACCAG*CAAGAG*CAGAU*AA*UGGUAG
- Length
- 54 nucleotides
- Bulged bases
- 6Z1P|1|Ab|U|719, 6Z1P|1|Ab|U|722, 6Z1P|1|Ab|A|813
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Z1P|1|Ab|C|692
6Z1P|1|Ab|G|693
6Z1P|1|Ab|A|694
6Z1P|1|Ab|A|695
6Z1P|1|Ab|A|696
6Z1P|1|Ab|C|697
*
6Z1P|1|Ab|G|710
6Z1P|1|Ab|G|711
6Z1P|1|Ab|U|712
6Z1P|1|Ab|G|713
6Z1P|1|Ab|U|714
6Z1P|1|Ab|U|715
6Z1P|1|Ab|A|716
6Z1P|1|Ab|U|717
6Z1P|1|Ab|U|718
6Z1P|1|Ab|U|719
6Z1P|1|Ab|U|720
6Z1P|1|Ab|U|721
6Z1P|1|Ab|U|722
6Z1P|1|Ab|A|723
*
6Z1P|1|Ab|U|800
6Z1P|1|Ab|U|801
6Z1P|1|Ab|A|802
6Z1P|1|Ab|G|803
6Z1P|1|Ab|A|804
6Z1P|1|Ab|U|805
6Z1P|1|Ab|A|806
6Z1P|1|Ab|A|807
6Z1P|1|Ab|U|808
6Z1P|1|Ab|A|809
6Z1P|1|Ab|A|810
6Z1P|1|Ab|C|811
6Z1P|1|Ab|C|812
6Z1P|1|Ab|A|813
6Z1P|1|Ab|G|814
*
6Z1P|1|Ab|C|839
6Z1P|1|Ab|A|840
6Z1P|1|Ab|A|841
6Z1P|1|Ab|G|842
6Z1P|1|Ab|A|843
6Z1P|1|Ab|G|844
*
6Z1P|1|Ab|C|855
6Z1P|1|Ab|A|856
6Z1P|1|Ab|G|857
6Z1P|1|Ab|A|858
6Z1P|1|Ab|U|859
*
6Z1P|1|Ab|A|1054
6Z1P|1|Ab|A|1055
*
6Z1P|1|Ab|U|1064
6Z1P|1|Ab|G|1065
6Z1P|1|Ab|G|1066
6Z1P|1|Ab|U|1067
6Z1P|1|Ab|A|1068
6Z1P|1|Ab|G|1069
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AA
- 50S ribosomal protein L27
- Chain AF
- bL35m
- Chain AL
- Large subunit ribosomal protein
- Chain AQ
- mL102
- Chain AR
- mL103
- Chain Aq
- Ribosomal protein L15, putative
- Chain Au
- 50S ribosomal protein L20
- Chain Av
- 50S ribosomal protein L21
Coloring options: