J7_6ZTJ_001

3D structure

PDB id

6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

6ZTJ|1|BA|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZTJ|1|BA|C|8
6ZTJ|1|BA|G|9
6ZTJ|1|BA|A|10
6ZTJ|1|BA|C|11
6ZTJ|1|BA|U|12
6ZTJ|1|BA|A|13
6ZTJ|1|BA|A|14
6ZTJ|1|BA|G|15
*
6ZTJ|1|BA|U|525
6ZTJ|1|BA|A|526
6ZTJ|1|BA|C|527
6ZTJ|1|BA|A|528
6ZTJ|1|BA|A|529
6ZTJ|1|BA|G|530
6ZTJ|1|BA|C|531
*
6ZTJ|1|BA|G|2018
6ZTJ|1|BA|A|2019
6ZTJ|1|BA|A|2020
6ZTJ|1|BA|C|2021
6ZTJ|1|BA|U|2022
6ZTJ|1|BA|C|2023
*
6ZTJ|1|BA|G|2040
6ZTJ|1|BA|U|2041
6ZTJ|1|BA|A|2042
6ZTJ|1|BA|C|2043
*
6ZTJ|1|BA|G|2625
6ZTJ|1|BA|C|2626
6ZTJ|1|BA|G|2627
6ZTJ|1|BA|C|2628
6ZTJ|1|BA|U|2629
6ZTJ|1|BA|G|2630
*
6ZTJ|1|BA|C|2788
6ZTJ|1|BA|C|2789
*
6ZTJ|1|BA|G|2894
6ZTJ|1|BA|G|2895

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L32

Chain BD

50S ribosomal protein L3

Chain BK

50S ribosomal protein L13

Chain BR

50S ribosomal protein L20

Chain BT

50S ribosomal protein L22