3D structure

PDB id
6ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in collided state bound to NusG
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
6ZTL|1|BA|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZTL|1|BA|C|817
6ZTL|1|BA|G|818
6ZTL|1|BA|A|819
6ZTL|1|BA|A|820
6ZTL|1|BA|A|821
6ZTL|1|BA|G|822
*
6ZTL|1|BA|C|835
6ZTL|1|BA|G|836
6ZTL|1|BA|C|837
6ZTL|1|BA|C|838
*
6ZTL|1|BA|G|940
6ZTL|1|BA|A|941
6ZTL|1|BA|G|942
6ZTL|1|BA|A|943
6ZTL|1|BA|C|944
6ZTL|1|BA|A|945
6ZTL|1|BA|C|946
*
6ZTL|1|BA|G|971
6ZTL|1|BA|A|972
6ZTL|1|BA|A|973
6ZTL|1|BA|G|974
6ZTL|1|BA|A|975
6ZTL|1|BA|G|976
*
6ZTL|1|BA|C|987
6ZTL|1|BA|A|988
6ZTL|1|BA|G|989
6ZTL|1|BA|A|990
6ZTL|1|BA|C|991
*
6ZTL|1|BA|G|1163
6ZTL|1|BA|C|1164
*
6ZTL|1|BA|G|1185
6ZTL|1|BA|G|1186
6ZTL|1|BA|G|1187
6ZTL|1|BA|U|1188
6ZTL|1|BA|A|1189
6ZTL|1|BA|G|1190

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B1
50S ribosomal protein L30
Chain B5
50S ribosomal protein L35
Chain BB
5S ribosomal RNA; 5S rRNA
Chain BM
50S ribosomal protein L15
Chain BR
50S ribosomal protein L20
Chain BS
50S ribosomal protein L21

Coloring options:

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