J7_6ZTN_001

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

6ZTN|1|BA|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZTN|1|BA|C|8
6ZTN|1|BA|G|9
6ZTN|1|BA|A|10
6ZTN|1|BA|C|11
6ZTN|1|BA|U|12
6ZTN|1|BA|A|13
6ZTN|1|BA|A|14
6ZTN|1|BA|G|15
*
6ZTN|1|BA|U|525
6ZTN|1|BA|A|526
6ZTN|1|BA|C|527
6ZTN|1|BA|A|528
6ZTN|1|BA|A|529
6ZTN|1|BA|G|530
6ZTN|1|BA|C|531
*
6ZTN|1|BA|G|2018
6ZTN|1|BA|A|2019
6ZTN|1|BA|A|2020
6ZTN|1|BA|C|2021
6ZTN|1|BA|U|2022
6ZTN|1|BA|C|2023
*
6ZTN|1|BA|G|2040
6ZTN|1|BA|U|2041
6ZTN|1|BA|A|2042
6ZTN|1|BA|C|2043
*
6ZTN|1|BA|G|2625
6ZTN|1|BA|C|2626
6ZTN|1|BA|G|2627
6ZTN|1|BA|C|2628
6ZTN|1|BA|U|2629
6ZTN|1|BA|G|2630
*
6ZTN|1|BA|C|2788
6ZTN|1|BA|C|2789
*
6ZTN|1|BA|G|2894
6ZTN|1|BA|G|2895

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L32

Chain BD

50S ribosomal protein L3

Chain BK

50S ribosomal protein L13

Chain BR

50S ribosomal protein L20

Chain BT

50S ribosomal protein L22