3D structure

PDB id
6ZU1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
6ZU1|1|BA|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZU1|1|BA|C|817
6ZU1|1|BA|G|818
6ZU1|1|BA|A|819
6ZU1|1|BA|A|820
6ZU1|1|BA|A|821
6ZU1|1|BA|G|822
*
6ZU1|1|BA|C|835
6ZU1|1|BA|G|836
6ZU1|1|BA|C|837
6ZU1|1|BA|C|838
*
6ZU1|1|BA|G|940
6ZU1|1|BA|A|941
6ZU1|1|BA|G|942
6ZU1|1|BA|A|943
6ZU1|1|BA|C|944
6ZU1|1|BA|A|945
6ZU1|1|BA|C|946
*
6ZU1|1|BA|G|971
6ZU1|1|BA|A|972
6ZU1|1|BA|A|973
6ZU1|1|BA|G|974
6ZU1|1|BA|A|975
6ZU1|1|BA|G|976
*
6ZU1|1|BA|C|987
6ZU1|1|BA|A|988
6ZU1|1|BA|G|989
6ZU1|1|BA|A|990
6ZU1|1|BA|C|991
*
6ZU1|1|BA|G|1163
6ZU1|1|BA|C|1164
*
6ZU1|1|BA|G|1185
6ZU1|1|BA|G|1186
6ZU1|1|BA|G|1187
6ZU1|1|BA|U|1188
6ZU1|1|BA|A|1189
6ZU1|1|BA|G|1190

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B1
50S ribosomal protein L30
Chain B5
50S ribosomal protein L35
Chain BB
5S ribosomal RNA; 5S rRNA
Chain BM
50S ribosomal protein L15
Chain BR
50S ribosomal protein L20
Chain BS
50S ribosomal protein L21

Coloring options:

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