3D structure

PDB id
7AC7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.08 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7AC7|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7AC7|1|1|C|817
7AC7|1|1|G|818
7AC7|1|1|A|819
7AC7|1|1|A|820
7AC7|1|1|A|821
7AC7|1|1|G|822
*
7AC7|1|1|C|835
7AC7|1|1|G|836
7AC7|1|1|C|837
7AC7|1|1|C|838
*
7AC7|1|1|G|940
7AC7|1|1|A|941
7AC7|1|1|G|942
7AC7|1|1|A|943
7AC7|1|1|C|944
7AC7|1|1|A|945
7AC7|1|1|C|946
*
7AC7|1|1|G|971
7AC7|1|1|A|972
7AC7|1|1|A|973
7AC7|1|1|G|974
7AC7|1|1|A|975
7AC7|1|1|G|976
*
7AC7|1|1|C|987
7AC7|1|1|A|988
7AC7|1|1|G|989
7AC7|1|1|A|990
7AC7|1|1|C|991
*
7AC7|1|1|G|1163
7AC7|1|1|C|1164
*
7AC7|1|1|G|1185
7AC7|1|1|G|1186
7AC7|1|1|G|1187
7AC7|1|1|U|1188
7AC7|1|1|A|1189
7AC7|1|1|G|1190

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30
Chain e
50S ribosomal protein L35

Coloring options:

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