Loop J7_7ASP

3D structure

PDB id: 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
Description: Staphylococcus aureus 70S after 50 minutes incubation at 37C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å

Loop

Sequence: GUUAUUAAGGG*CUUACAAGU*AUAGUA*UUAC*GCGUAGG*CCCAACUUCGGUUAUAAG*CGAAGAC
Length: 62 nucleotides
Bulged bases: 7ASP|1|Y|A|2656, 7ASP|1|Y|A|2830
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7ASP|1|Y|G|7
7ASP|1|Y|U|8
7ASP|1|Y|U|9
7ASP|1|Y|A|10
7ASP|1|Y|U|11
7ASP|1|Y|U|12
7ASP|1|Y|A|13
7ASP|1|Y|A|14
7ASP|1|Y|G|15
7ASP|1|Y|G|16
7ASP|1|Y|G|17
*
7ASP|1|Y|C|568
7ASP|1|Y|U|569
7ASP|1|Y|U|570
7ASP|1|Y|A|571
7ASP|1|Y|C|572
7ASP|1|Y|A|573
7ASP|1|Y|A|574
7ASP|1|Y|G|575
7ASP|1|Y|U|576
*
7ASP|1|Y|A|2045
7ASP|1|Y|U|2046
7ASP|1|Y|A|2047
7ASP|1|Y|G|2048
7ASP|1|Y|U|2049
7ASP|1|Y|A|2050
*
7ASP|1|Y|U|2067
7ASP|1|Y|U|2068
7ASP|1|Y|A|2069
7ASP|1|Y|C|2070
*
7ASP|1|Y|G|2652
7ASP|1|Y|C|2653
7ASP|1|Y|G|2654
7ASP|1|Y|U|2655
7ASP|1|Y|A|2656
7ASP|1|Y|G|2657
7ASP|1|Y|G|2658
*
7ASP|1|Y|C|2814
7ASP|1|Y|C|2815
7ASP|1|Y|C|2816
7ASP|1|Y|A|2817
7ASP|1|Y|A|2818
7ASP|1|Y|C|2819
7ASP|1|Y|U|2820
7ASP|1|Y|U|2821
7ASP|1|Y|C|2822
7ASP|1|Y|G|2823
7ASP|1|Y|G|2824
7ASP|1|Y|U|2825
7ASP|1|Y|U|2826
7ASP|1|Y|A|2827
7ASP|1|Y|U|2828
7ASP|1|Y|A|2829
7ASP|1|Y|A|2830
7ASP|1|Y|G|2831
*
7ASP|1|Y|C|2909
7ASP|1|Y|G|2910
7ASP|1|Y|A|2911
7ASP|1|Y|A|2912
7ASP|1|Y|G|2913
7ASP|1|Y|A|2914
7ASP|1|Y|C|2915

Current chains

Chain Y: 23S rRNA

Nearby chains

Chain D: 50S ribosomal protein L3
Chain H: 50S ribosomal protein L13
Chain O: 50S ribosomal protein L20
Chain Q: 50S ribosomal protein L22
Chain Z: 50S ribosomalprotein L32p

J7_7ASP_001