3D structure

PDB id
7AZY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Context-specific inhibition of eukaryotic translation by macrolide antibiotics
Experimental method
ELECTRON MICROSCOPY
Resolution
2.877 Å

Loop

Sequence
CGAAGU*AG*UGGG*CGAUGC*GAACG*CC*GAGUAG
Length
31 nucleotides
Bulged bases
7AZY|1|E|G|1116
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7AZY|1|E|C|949
7AZY|1|E|G|950
7AZY|1|E|A|951
7AZY|1|E|A|952
7AZY|1|E|G|953
7AZY|1|E|U|954
*
7AZY|1|E|A|967
7AZY|1|E|G|968
*
7AZY|1|E|U|1114
7AZY|1|E|G|1115
7AZY|1|E|G|1116
7AZY|1|E|G|1117
*
7AZY|1|E|C|1141
7AZY|1|E|G|1142
7AZY|1|E|A|1143
7AZY|1|E|U|1144
7AZY|1|E|G|1145
7AZY|1|E|C|1146
*
7AZY|1|E|G|1157
7AZY|1|E|A|1158
7AZY|1|E|A|1159
7AZY|1|E|C|1160
7AZY|1|E|G|1161
*
7AZY|1|E|C|1338
7AZY|1|E|C|1339
*
7AZY|1|E|G|1365
7AZY|1|E|A|1366
7AZY|1|E|G|1367
7AZY|1|E|U|1368
7AZY|1|E|A|1369
7AZY|1|E|G|1370

Current chains

Chain E
25S ribosomal RNA

Nearby chains

Chain C
60S ribosomal protein L7-A
Chain F
5S ribosomal RNA; 5S rRNA
Chain S
60S ribosomal protein L28
Chain W
60S ribosomal protein L29
Chain k
60S ribosomal protein L13-A
Chain m
60S ribosomal protein L18-A
Chain p
60S ribosomal protein L4-A
Chain r
60S ribosomal protein L32
Chain u
60S ribosomal protein L21-A
Chain v
60S ribosomal protein L33-A

Coloring options:

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