3D structure

PDB id
7BL2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
pre-50S-ObgE particle state 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CGAAAG*CGCC*GAGACACA*UGAAGAG*CAGAC*GC*GGGUAG
Length
38 nucleotides
Bulged bases
7BL2|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7BL2|1|A|C|817
7BL2|1|A|G|818
7BL2|1|A|A|819
7BL2|1|A|A|820
7BL2|1|A|A|821
7BL2|1|A|G|822
*
7BL2|1|A|C|835
7BL2|1|A|G|836
7BL2|1|A|C|837
7BL2|1|A|C|838
*
7BL2|1|A|G|940
7BL2|1|A|A|941
7BL2|1|A|G|942
7BL2|1|A|A|943
7BL2|1|A|C|944
7BL2|1|A|A|945
7BL2|1|A|C|946
7BL2|1|A|A|947
*
7BL2|1|A|U|970
7BL2|1|A|G|971
7BL2|1|A|A|972
7BL2|1|A|A|973
7BL2|1|A|G|974
7BL2|1|A|A|975
7BL2|1|A|G|976
*
7BL2|1|A|C|987
7BL2|1|A|A|988
7BL2|1|A|G|989
7BL2|1|A|A|990
7BL2|1|A|C|991
*
7BL2|1|A|G|1163
7BL2|1|A|C|1164
*
7BL2|1|A|G|1185
7BL2|1|A|G|1186
7BL2|1|A|G|1187
7BL2|1|A|U|1188
7BL2|1|A|A|1189
7BL2|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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