3D structure

PDB id
7BL3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
pre-50S-ObgE particle state 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7BL3|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7BL3|1|A|C|817
7BL3|1|A|G|818
7BL3|1|A|A|819
7BL3|1|A|A|820
7BL3|1|A|A|821
7BL3|1|A|G|822
*
7BL3|1|A|C|835
7BL3|1|A|G|836
7BL3|1|A|C|837
7BL3|1|A|C|838
*
7BL3|1|A|G|940
7BL3|1|A|A|941
7BL3|1|A|G|942
7BL3|1|A|A|943
7BL3|1|A|C|944
7BL3|1|A|A|945
7BL3|1|A|C|946
*
7BL3|1|A|G|971
7BL3|1|A|A|972
7BL3|1|A|A|973
7BL3|1|A|G|974
7BL3|1|A|A|975
7BL3|1|A|G|976
*
7BL3|1|A|C|987
7BL3|1|A|A|988
7BL3|1|A|G|989
7BL3|1|A|A|990
7BL3|1|A|C|991
*
7BL3|1|A|G|1163
7BL3|1|A|C|1164
*
7BL3|1|A|G|1185
7BL3|1|A|G|1186
7BL3|1|A|G|1187
7BL3|1|A|U|1188
7BL3|1|A|A|1189
7BL3|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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