J7_7BL4_001

3D structure

PDB id

7BL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

7BL4|1|A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BL4|1|A|C|8
7BL4|1|A|G|9
7BL4|1|A|A|10
7BL4|1|A|C|11
7BL4|1|A|U|12
7BL4|1|A|A|13
7BL4|1|A|A|14
7BL4|1|A|G|15
*
7BL4|1|A|U|525
7BL4|1|A|A|526
7BL4|1|A|C|527
7BL4|1|A|A|528
7BL4|1|A|A|529
7BL4|1|A|G|530
7BL4|1|A|C|531
*
7BL4|1|A|G|2018
7BL4|1|A|A|2019
7BL4|1|A|A|2020
7BL4|1|A|C|2021
7BL4|1|A|U|2022
7BL4|1|A|C|2023
*
7BL4|1|A|G|2040
7BL4|1|A|U|2041
7BL4|1|A|A|2042
7BL4|1|A|C|2043
*
7BL4|1|A|G|2625
7BL4|1|A|C|2626
7BL4|1|A|G|2627
7BL4|1|A|C|2628
7BL4|1|A|U|2629
7BL4|1|A|G|2630
*
7BL4|1|A|C|2788
7BL4|1|A|C|2789
*
7BL4|1|A|G|2894
7BL4|1|A|G|2895

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22